Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 IGHV3-62-201ENST00000520057 340 ntBASIC15.56■□□□□ 0.08
PDGFAP04085 IGHV3-42-201ENST00000520410 361 ntBASIC15.56■□□□□ 0.08
PDGFAP04085 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.56■□□□□ 0.08
PDGFAP04085 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 AC140878.1-201ENST00000565277 250 ntBASIC15.56■□□□□ 0.08
PDGFAP04085 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 AL589935.2-201ENST00000616471 1231 ntBASIC15.56■□□□□ 0.08
PDGFAP04085 AC008761.3-201ENST00000624803 892 ntBASIC15.56■□□□□ 0.08
PDGFAP04085 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.55■□□□□ 0.08
PDGFAP04085 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PDGFAP04085 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.55■□□□□ 0.08
PDGFAP04085 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 SLC25A6P5-201ENST00000435663 894 ntBASIC15.55■□□□□ 0.08
PDGFAP04085 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.55■□□□□ 0.08
PDGFAP04085 AL009183.1-201ENST00000603760 355 ntBASIC15.55■□□□□ 0.08
PDGFAP04085 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 AL161645.1-201ENST00000622716 1255 ntBASIC15.55■□□□□ 0.08
PDGFAP04085 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDGFAP04085 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PDGFAP04085 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.55■□□□□ 0.08
PDGFAP04085 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PDGFAP04085 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
PDGFAP04085 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.54■□□□□ 0.08
PDGFAP04085 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.54■□□□□ 0.08
PDGFAP04085 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.54■□□□□ 0.08
PDGFAP04085 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.54■□□□□ 0.08
PDGFAP04085 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.54■□□□□ 0.08
PDGFAP04085 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.54■□□□□ 0.08
PDGFAP04085 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDGFAP04085 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.53■□□□□ 0.08
PDGFAP04085 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDGFAP04085 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms