Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 AC068587.3-201ENST00000526613 355 ntBASIC18.66■□□□□ 0.58
ALDH1A1P00352 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 Z97205.2-201ENST00000564697 1639 ntBASIC18.65■□□□□ 0.58
ALDH1A1P00352 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 AC006033.1-201ENST00000440505 426 ntBASIC18.65■□□□□ 0.58
ALDH1A1P00352 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 RNA5SP423-201ENST00000517127 109 ntBASIC18.65■□□□□ 0.58
ALDH1A1P00352 AP001889.1-201ENST00000525414 633 ntBASIC18.65■□□□□ 0.58
ALDH1A1P00352 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALDH1A1P00352 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
ALDH1A1P00352 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ALDH1A1P00352 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 SNX33P1-201ENST00000592116 1762 ntBASIC18.64■□□□□ 0.57
ALDH1A1P00352 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 HIST3H2BA-201ENST00000436555 524 ntBASIC18.64■□□□□ 0.57
ALDH1A1P00352 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.64■□□□□ 0.57
ALDH1A1P00352 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALDH1A1P00352 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AC093503.3-201ENST00000624917 2352 ntBASIC18.63■□□□□ 0.57
ALDH1A1P00352 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 SLC25A24P2-201ENST00000415059 510 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms