Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.04□□□□□ -0.32
TOMM40O96008 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TOMM40O96008 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TOMM40O96008 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TOMM40O96008 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.04□□□□□ -0.32
TOMM40O96008 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TOMM40O96008 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TOMM40O96008 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
TOMM40O96008 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.03□□□□□ -0.32
TOMM40O96008 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
TOMM40O96008 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.03□□□□□ -0.32
TOMM40O96008 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.03□□□□□ -0.32
TOMM40O96008 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.03□□□□□ -0.32
TOMM40O96008 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.03□□□□□ -0.32
TOMM40O96008 MIR3652-201ENST00000579335 131 ntBASIC13.03□□□□□ -0.32
TOMM40O96008 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 AL355877.3-201ENST00000622820 899 ntBASIC13.03□□□□□ -0.32
TOMM40O96008 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.03□□□□□ -0.32
TOMM40O96008 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TOMM40O96008 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.03□□□□□ -0.32
TOMM40O96008 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TOMM40O96008 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TOMM40O96008 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 GGT3P-204ENST00000453783 1664 ntBASIC13.02□□□□□ -0.32
TOMM40O96008 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.02□□□□□ -0.32
TOMM40O96008 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
TOMM40O96008 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TOMM40O96008 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TOMM40O96008 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.02□□□□□ -0.33
TOMM40O96008 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 SCARNA2-201ENST00000458748 420 ntBASIC13.02□□□□□ -0.33
TOMM40O96008 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.02□□□□□ -0.33
TOMM40O96008 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.02□□□□□ -0.33
TOMM40O96008 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.02□□□□□ -0.33
TOMM40O96008 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.02□□□□□ -0.33
TOMM40O96008 MPDU1-223ENST00000582151 728 ntBASIC13.02□□□□□ -0.33
TOMM40O96008 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.02□□□□□ -0.33
TOMM40O96008 AL445228.2-201ENST00000605589 952 ntBASIC13.02□□□□□ -0.33
TOMM40O96008 AC004706.3-202ENST00000621574 984 ntBASIC13.02□□□□□ -0.33
TOMM40O96008 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
TOMM40O96008 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TOMM40O96008 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.02□□□□□ -0.33
TOMM40O96008 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 AC092364.2-201ENST00000596710 2692 ntBASIC13.02□□□□□ -0.33
TOMM40O96008 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
TOMM40O96008 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TOMM40O96008 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TOMM40O96008 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms