Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 HLA-J-202ENST00000469281 1241 ntBASIC15.12■□□□□ 0.01
CLPXO76031 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.12■□□□□ 0.01
CLPXO76031 MIR3917-201ENST00000580971 93 ntBASIC15.12■□□□□ 0.01
CLPXO76031 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.12■□□□□ 0.01
CLPXO76031 AC011558.1-201ENST00000623459 338 ntBASIC15.12■□□□□ 0.01
CLPXO76031 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLPXO76031 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 AC139749.1-202ENST00000617529 3139 ntBASIC15.12■□□□□ 0.01
CLPXO76031 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLPXO76031 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.12■□□□□ 0.01
CLPXO76031 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CLPXO76031 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.11■□□□□ 0.01
CLPXO76031 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 AC002558.1-201ENST00000488906 803 ntBASIC15.11■□□□□ 0.01
CLPXO76031 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.11■□□□□ 0.01
CLPXO76031 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 GCSHP2-201ENST00000560971 527 ntBASIC15.11■□□□□ 0.01
CLPXO76031 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLPXO76031 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLPXO76031 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLPXO76031 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.11■□□□□ 0.01
CLPXO76031 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLPXO76031 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 PRAL-201ENST00000624952 3286 ntBASIC15.1■□□□□ 0.01
CLPXO76031 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.1■□□□□ 0.01
CLPXO76031 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLPXO76031 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms