Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 FDX1P1-201ENST00000449115 551 ntBASIC16.54■□□□□ 0.24
NDUFS3O75489 RPL13AP23-201ENST00000480739 586 ntBASIC16.54■□□□□ 0.24
NDUFS3O75489 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFS3O75489 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 AC096734.2-201ENST00000562054 433 ntBASIC16.54■□□□□ 0.24
NDUFS3O75489 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFS3O75489 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFS3O75489 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NDUFS3O75489 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFS3O75489 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFS3O75489 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFS3O75489 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.53■□□□□ 0.24
NDUFS3O75489 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NDUFS3O75489 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 PCGF3-213ENST00000620529 1899 ntBASIC16.53■□□□□ 0.24
NDUFS3O75489 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
NDUFS3O75489 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.53■□□□□ 0.24
NDUFS3O75489 AL590627.1-203ENST00000421194 1026 ntBASIC16.53■□□□□ 0.24
NDUFS3O75489 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 AC145285.3-201ENST00000564603 959 ntBASIC16.53■□□□□ 0.24
NDUFS3O75489 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 AC010507.1-201ENST00000633895 436 ntBASIC16.53■□□□□ 0.24
NDUFS3O75489 AC007064.4-201ENST00000637740 555 ntBASIC16.53■□□□□ 0.24
NDUFS3O75489 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NDUFS3O75489 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.53■□□□□ 0.24
NDUFS3O75489 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
NDUFS3O75489 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS3O75489 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.52■□□□□ 0.24
NDUFS3O75489 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 IL9RP2-201ENST00000423948 1312 ntBASIC16.52■□□□□ 0.24
NDUFS3O75489 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NDUFS3O75489 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.52■□□□□ 0.24
NDUFS3O75489 AL031055.1-201ENST00000606362 631 ntBASIC16.52■□□□□ 0.24
NDUFS3O75489 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NDUFS3O75489 AC020765.3-201ENST00000613051 740 ntBASIC16.52■□□□□ 0.24
NDUFS3O75489 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFS3O75489 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.52■□□□□ 0.24
NDUFS3O75489 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NDUFS3O75489 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFS3O75489 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NDUFS3O75489 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFS3O75489 DOC2GP-204ENST00000639052 2548 ntBASIC16.52■□□□□ 0.23
NDUFS3O75489 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFS3O75489 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms