Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.87□□□□□ -0.03
TVP23AA6NH52 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TVP23AA6NH52 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 AC007950.2-201ENST00000615045 2347 ntBASIC14.86□□□□□ -0.03
TVP23AA6NH52 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 SLC25A6P2-201ENST00000497974 877 ntBASIC14.86□□□□□ -0.03
TVP23AA6NH52 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 MIR4492-201ENST00000581627 80 ntBASIC14.86□□□□□ -0.03
TVP23AA6NH52 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 AC012313.10-201ENST00000623509 926 ntBASIC14.86□□□□□ -0.03
TVP23AA6NH52 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.86□□□□□ -0.03
TVP23AA6NH52 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TVP23AA6NH52 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 AL031731.1-201ENST00000642131 2094 ntBASIC14.85□□□□□ -0.03
TVP23AA6NH52 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 PMS2P1-201ENST00000431037 1228 ntBASIC14.85□□□□□ -0.03
TVP23AA6NH52 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 AF238378.1-201ENST00000526806 358 ntBASIC14.85□□□□□ -0.03
TVP23AA6NH52 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.85□□□□□ -0.03
TVP23AA6NH52 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TVP23AA6NH52 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TVP23AA6NH52 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms