Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 AL136379.1-201ENST00000623471 2642 ntBASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 AC090616.6-201ENST00000582640 721 ntBASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV18A0A075B6X5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 RNF152P1-201ENST00000397754 604 ntBASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AL137013.1-201ENST00000432946 1228 ntBASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC011467.2-201ENST00000598425 242 ntBASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC022532.1-201ENST00000624563 1728 ntBASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 AC097637.2-201ENST00000624096 1997 ntBASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV18A0A075B6X5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV18A0A075B6X5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms