Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC007967.4-201ENST00000614700 386 ntBASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1G3Q9Y6M4 AP3S2-216ENST00000617003 1561 ntBASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AC236430.1-201ENST00000402231 743 ntBASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AC092580.3-201ENST00000430932 139 ntBASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 PRYP6-201ENST00000514804 343 ntBASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSNK1G3Q9Y6M4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 AC046158.3-201ENST00000624947 2558 ntBASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSNK1G3Q9Y6M4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 HLA-H-201ENST00000383620 1096 ntBASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AC073592.8-201ENST00000624126 511 ntBASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AC008761.3-201ENST00000624803 892 ntBASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 AC084018.2-201ENST00000613093 2607 ntBASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CSNK1G3Q9Y6M4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms