Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 REXO1L8P-201ENST00000604378 1897 ntBASIC15.74■□□□□ 0.11
AP4S1Q9Y587 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.73■□□□□ 0.11
AP4S1Q9Y587 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 AL138966.2-201ENST00000621997 464 ntBASIC15.73■□□□□ 0.11
AP4S1Q9Y587 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4S1Q9Y587 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 AP002414.1-201ENST00000391405 1147 ntBASIC15.72■□□□□ 0.11
AP4S1Q9Y587 STARP1-201ENST00000397973 869 ntBASIC15.72■□□□□ 0.11
AP4S1Q9Y587 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.72■□□□□ 0.11
AP4S1Q9Y587 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.72■□□□□ 0.11
AP4S1Q9Y587 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.72■□□□□ 0.11
AP4S1Q9Y587 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4S1Q9Y587 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms