Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF11Q9Y3C5 DBET-201ENST00000630918 3363 ntBASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC144831.1-201ENST00000573312 2656 ntBASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC105339.3-201ENST00000560043 636 ntBASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC091167.2-201ENST00000579581 588 ntBASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 AC008667.4-201ENST00000607370 168 ntBASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF11Q9Y3C5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF11Q9Y3C5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 KRT8P39-201ENST00000396270 1433 ntBASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 KRT18P67-201ENST00000432816 1264 ntBASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AF186996.4-201ENST00000467186 377 ntBASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 IGHV3-65-201ENST00000523210 341 ntBASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 MIR1199-201ENST00000621445 119 ntBASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 GGT3P-204ENST00000453783 1664 ntBASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF11Q9Y3C5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF11Q9Y3C5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF11Q9Y3C5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms