Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 MIR1224-201ENST00000408193 85 ntBASIC19.06■□□□□ 0.64
USP25Q9UHP3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 KRT18P31-201ENST00000506277 1292 ntBASIC19.06■□□□□ 0.64
USP25Q9UHP3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 AC139887.3-201ENST00000568585 713 ntBASIC19.06■□□□□ 0.64
USP25Q9UHP3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP25Q9UHP3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP25Q9UHP3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 AC006277.1-201ENST00000624348 1610 ntBASIC19.05■□□□□ 0.64
USP25Q9UHP3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 TSPY19P-201ENST00000418461 509 ntBASIC19.05■□□□□ 0.64
USP25Q9UHP3 TSPY18P-201ENST00000441642 509 ntBASIC19.05■□□□□ 0.64
USP25Q9UHP3 PAWRP1-201ENST00000451083 565 ntBASIC19.05■□□□□ 0.64
USP25Q9UHP3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 LINC02228-204ENST00000642115 2962 ntBASIC19.05■□□□□ 0.64
USP25Q9UHP3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.05■□□□□ 0.64
USP25Q9UHP3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP25Q9UHP3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 AF228730.7-201ENST00000641842 219 ntBASIC19.04■□□□□ 0.64
USP25Q9UHP3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP25Q9UHP3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms