Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 PCDHA14-201ENST00000506751 2298 ntBASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 AC004890.2-204ENST00000481968 304 ntBASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KIAA1549Q9HCM3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 MIR943-201ENST00000401286 94 ntBASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 TSPY16P-201ENST00000449843 468 ntBASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 RN7SL204P-201ENST00000582831 262 ntBASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 AL662844.4-201ENST00000606367 2838 ntBASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 AC002472.2-201ENST00000442739 958 ntBASIC14.65□□□□□ -0.06
KIAA1549Q9HCM3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms