Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM215A-202ENST00000632077 792 ntBASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.83■□□□□ 0.76
UPF3BQ9BZI7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPF3BQ9BZI7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 AL596087.1-201ENST00000400979 1969 ntBASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 GPAA1P2-202ENST00000606848 1787 ntBASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 AC087641.1-201ENST00000557561 1021 ntBASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 AC004790.2-201ENST00000623588 572 ntBASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.81■□□□□ 0.76
UPF3BQ9BZI7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 AC129492.6-201ENST00000611383 1305 ntBASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 AC005412.3-201ENST00000580309 715 ntBASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 MIR7706-201ENST00000613747 67 ntBASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms