Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.97□□□□□ -0.33
TRGV9Q99603 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV9Q99603 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV9Q99603 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRGV9Q99603 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV9Q99603 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV9Q99603 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV9Q99603 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRGV9Q99603 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV9Q99603 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRGV9Q99603 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV9Q99603 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRGV9Q99603 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.96□□□□□ -0.33
TRGV9Q99603 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV9Q99603 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRGV9Q99603 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 HCG4-201ENST00000418983 998 ntBASIC12.96□□□□□ -0.33
TRGV9Q99603 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV9Q99603 SCARNA2-201ENST00000458748 420 ntBASIC12.96□□□□□ -0.33
TRGV9Q99603 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.96□□□□□ -0.33
TRGV9Q99603 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 AC005412.3-201ENST00000580309 715 ntBASIC12.96□□□□□ -0.33
TRGV9Q99603 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 AL732292.2-201ENST00000609649 430 ntBASIC12.96□□□□□ -0.33
TRGV9Q99603 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV9Q99603 AC010654.1-201ENST00000615722 808 ntBASIC12.96□□□□□ -0.33
TRGV9Q99603 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.96□□□□□ -0.33
TRGV9Q99603 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV9Q99603 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRGV9Q99603 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV9Q99603 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV9Q99603 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.96□□□□□ -0.34
TRGV9Q99603 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV9Q99603 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
TRGV9Q99603 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV9Q99603 SLC22A20-204ENST00000530038 1673 ntBASIC12.96□□□□□ -0.34
TRGV9Q99603 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TRGV9Q99603 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRGV9Q99603 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
TRGV9Q99603 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRGV9Q99603 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV9Q99603 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRGV9Q99603 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV9Q99603 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV9Q99603 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.95□□□□□ -0.34
TRGV9Q99603 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 SLC25A6P2-201ENST00000497974 877 ntBASIC12.95□□□□□ -0.34
TRGV9Q99603 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV9Q99603 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV9Q99603 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV9Q99603 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV9Q99603 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TRGV9Q99603 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.95□□□□□ -0.34
TRGV9Q99603 AC006557.2-201ENST00000592985 1240 ntBASIC12.95□□□□□ -0.34
TRGV9Q99603 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV9Q99603 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV9Q99603 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
TRGV9Q99603 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV9Q99603 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRGV9Q99603 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV9Q99603 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms