Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 AC020763.4-201ENST00000623414 4170 ntBASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 TMEM14DP-201ENST00000422205 345 ntBASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 AC119751.2-201ENST00000504529 210 ntBASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 MIR4259-201ENST00000584466 101 ntBASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 NOC2LP2-201ENST00000407594 1944 ntBASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CRAMP1Q96RY5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 RARRES2P5-201ENST00000564013 466 ntBASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CRAMP1Q96RY5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 AC026471.1-201ENST00000564629 3026 ntBASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 MIR8072-201ENST00000614241 80 ntBASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CRAMP1Q96RY5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.02■□□□□ 0.79
CRAMP1Q96RY5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CRAMP1Q96RY5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CRAMP1Q96RY5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CRAMP1Q96RY5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 TIMM17BP1-201ENST00000545713 516 ntBASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 AP005482.1-201ENST00000563722 1273 ntBASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CRAMP1Q96RY5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms