Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 LINC02228-203ENST00000641970 1355 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AL365203.3-201ENST00000609742 2057 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 KRT19P1-201ENST00000405746 1186 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 TSPY23P-201ENST00000440136 739 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AC007322.4-201ENST00000509611 723 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 RARRES2P4-201ENST00000514074 484 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 MIR4466-201ENST00000606121 54 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CICP17-201ENST00000418553 2377 ntBASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms