Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AL671710.1-201ENST00000610245 2349 ntBASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 POU5F1P6-201ENST00000466990 990 ntBASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AF238378.1-201ENST00000526806 358 ntBASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AF228730.7-201ENST00000641842 219 ntBASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 AC006449.6-201ENST00000612330 2296 ntBASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 MTDHP4-201ENST00000600287 670 ntBASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 REXO1L3P-201ENST00000622202 1288 ntBASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN22Q8N7P3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.14■□□□□ 0.01
CLDN22Q8N7P3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms