Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 AC010507.1-201ENST00000633895 436 ntBASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF440Q8IYI8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF440Q8IYI8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 AC109635.5-201ENST00000533593 962 ntBASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms