Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC068418.2-201ENST00000577309 3703 ntBASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 KRT16P4-201ENST00000453883 522 ntBASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC096582.2-201ENST00000510860 516 ntBASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC005336.2-201ENST00000593183 939 ntBASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AL596087.1-201ENST00000400979 1969 ntBASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC132938.5-201ENST00000624980 1813 ntBASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CRLF3Q8IUI8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.64■□□□□ 0.26
CRLF3Q8IUI8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 MST1L-201ENST00000442552 2185 ntBASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 AC067930.6-201ENST00000623257 4947 ntBASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 POM121L3P-201ENST00000419331 1163 ntBASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 AC104640.1-201ENST00000562617 2109 ntBASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CRLF3Q8IUI8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms