Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LDB1Q86U70 KRT18P2-201ENST00000447938 1258 ntBASIC16.58■□□□□ 0.24
LDB1Q86U70 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.58■□□□□ 0.24
LDB1Q86U70 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.58■□□□□ 0.24
LDB1Q86U70 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LDB1Q86U70 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.58■□□□□ 0.24
LDB1Q86U70 GPAA1P2-202ENST00000606848 1787 ntBASIC16.58■□□□□ 0.24
LDB1Q86U70 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LDB1Q86U70 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LDB1Q86U70 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LDB1Q86U70 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LDB1Q86U70 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.57■□□□□ 0.24
LDB1Q86U70 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.57■□□□□ 0.24
LDB1Q86U70 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.57■□□□□ 0.24
LDB1Q86U70 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.57■□□□□ 0.24
LDB1Q86U70 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 AL391005.1-201ENST00000623953 2435 ntBASIC16.57■□□□□ 0.24
LDB1Q86U70 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
LDB1Q86U70 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB1Q86U70 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.56■□□□□ 0.24
LDB1Q86U70 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
LDB1Q86U70 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
LDB1Q86U70 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LDB1Q86U70 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LDB1Q86U70 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.56■□□□□ 0.24
LDB1Q86U70 AC145285.3-201ENST00000564603 959 ntBASIC16.56■□□□□ 0.24
LDB1Q86U70 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.56■□□□□ 0.24
LDB1Q86U70 AC064836.3-201ENST00000607928 673 ntBASIC16.56■□□□□ 0.24
LDB1Q86U70 AC120114.3-201ENST00000611923 658 ntBASIC16.56■□□□□ 0.24
LDB1Q86U70 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LDB1Q86U70 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LDB1Q86U70 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms