Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AC015936.2-201ENST00000593177 259 ntBASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AC008735.3-201ENST00000596646 500 ntBASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 AL033527.5-201ENST00000641382 801 ntBASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CNKSR3Q6P9H4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.64■□□□□ 0.42
CNKSR3Q6P9H4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNKSR3Q6P9H4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNKSR3Q6P9H4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 BOLA2P3-201ENST00000404566 256 ntBASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 AC025048.3-201ENST00000590609 569 ntBASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 MIR8072-201ENST00000614241 80 ntBASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 AC005702.4-201ENST00000618393 416 ntBASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNKSR3Q6P9H4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 AC104596.2-201ENST00000512793 793 ntBASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 RARRES2P5-201ENST00000564013 466 ntBASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 MIR6775-201ENST00000617557 69 ntBASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.63■□□□□ 0.41
CNKSR3Q6P9H4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms