Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SWSAP1Q6NVH7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 AC125807.1-201ENST00000483097 614 ntBASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 AL390955.2-201ENST00000603032 514 ntBASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 AC018529.1-201ENST00000613063 361 ntBASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 HLA-A-202ENST00000376806 1854 ntBASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SWSAP1Q6NVH7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 MIR943-201ENST00000401286 94 ntBASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AC107890.1-201ENST00000422478 521 ntBASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AC098859.1-201ENST00000502915 1238 ntBASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 AC003101.2-201ENST00000612557 442 ntBASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SWSAP1Q6NVH7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.39■□□□□ 0.54
SWSAP1Q6NVH7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 AC093724.1-201ENST00000448659 1027 ntBASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms