Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 MIR1224-201ENST00000408193 85 ntBASIC14.33□□□□□ -0.12
ACTBP60709 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.33□□□□□ -0.12
ACTBP60709 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 KRT8P26-201ENST00000534154 1276 ntBASIC14.33□□□□□ -0.12
ACTBP60709 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 AC090616.6-201ENST00000582640 721 ntBASIC14.33□□□□□ -0.12
ACTBP60709 IGHV3-41-201ENST00000613121 348 ntBASIC14.33□□□□□ -0.12
ACTBP60709 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.33□□□□□ -0.12
ACTBP60709 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.33□□□□□ -0.12
ACTBP60709 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTBP60709 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 GGT3P-204ENST00000453783 1664 ntBASIC14.33□□□□□ -0.12
ACTBP60709 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.33□□□□□ -0.12
ACTBP60709 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ACTBP60709 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.32□□□□□ -0.12
ACTBP60709 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.32□□□□□ -0.12
ACTBP60709 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ACTBP60709 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTBP60709 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 ARMC10P1-201ENST00000313754 855 ntBASIC14.32□□□□□ -0.12
ACTBP60709 KLF4P1-201ENST00000412782 1185 ntBASIC14.32□□□□□ -0.12
ACTBP60709 PCED1CP-201ENST00000419887 785 ntBASIC14.32□□□□□ -0.12
ACTBP60709 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ACTBP60709 BX276092.5-203ENST00000456199 560 ntBASIC14.32□□□□□ -0.12
ACTBP60709 KRT18P35-201ENST00000510488 1269 ntBASIC14.32□□□□□ -0.12
ACTBP60709 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.32□□□□□ -0.12
ACTBP60709 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.32□□□□□ -0.12
ACTBP60709 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTBP60709 AL121672.3-201ENST00000608644 468 ntBASIC14.32□□□□□ -0.12
ACTBP60709 AC010331.1-201ENST00000611423 582 ntBASIC14.32□□□□□ -0.12
ACTBP60709 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ACTBP60709 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTBP60709 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTBP60709 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 IER3-202ENST00000376377 1350 ntBASIC14.32□□□□□ -0.12
ACTBP60709 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTBP60709 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 AC010491.1-201ENST00000563101 2797 ntBASIC14.32□□□□□ -0.12
ACTBP60709 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTBP60709 AC125634.1-201ENST00000438758 1403 ntBASIC14.32□□□□□ -0.12
ACTBP60709 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTBP60709 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTBP60709 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms