Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CDH4P55283 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.92■□□□□ 0.3
CDH4P55283 TSEN15P1-201ENST00000423257 515 ntBASIC16.92■□□□□ 0.3
CDH4P55283 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH4P55283 AC142381.1-201ENST00000426099 345 ntBASIC16.92■□□□□ 0.3
CDH4P55283 FAM58DP-201ENST00000428076 619 ntBASIC16.92■□□□□ 0.3
CDH4P55283 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.92■□□□□ 0.3
CDH4P55283 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH4P55283 SLC25A39P2-201ENST00000537614 270 ntBASIC16.92■□□□□ 0.3
CDH4P55283 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH4P55283 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH4P55283 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH4P55283 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH4P55283 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 KRT18P28-201ENST00000453838 1332 ntBASIC16.92■□□□□ 0.3
CDH4P55283 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDH4P55283 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDH4P55283 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 PCDHA12-202ENST00000613593 2588 ntBASIC16.91■□□□□ 0.3
CDH4P55283 NKILA-202ENST00000614771 2598 ntBASIC16.91■□□□□ 0.3
CDH4P55283 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH4P55283 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 AC093724.1-201ENST00000448659 1027 ntBASIC16.91■□□□□ 0.3
CDH4P55283 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 HLA-J-203ENST00000494367 1087 ntBASIC16.91■□□□□ 0.3
CDH4P55283 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.91■□□□□ 0.3
CDH4P55283 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH4P55283 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CDH4P55283 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH4P55283 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH4P55283 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH4P55283 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.9■□□□□ 0.3
CDH4P55283 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH4P55283 METTL21AP1-201ENST00000438852 635 ntBASIC16.9■□□□□ 0.3
CDH4P55283 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH4P55283 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH4P55283 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.9■□□□□ 0.3
CDH4P55283 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH4P55283 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH4P55283 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH4P55283 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.9■□□□□ 0.3
CDH4P55283 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CDH4P55283 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH4P55283 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH4P55283 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH4P55283 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CDH4P55283 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.89■□□□□ 0.3
CDH4P55283 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH4P55283 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms