Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC129492.6-201ENST00000611383 1305 ntBASIC15.39■□□□□ 0.05
HTR3AP46098 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.39■□□□□ 0.05
HTR3AP46098 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.38■□□□□ 0.05
HTR3AP46098 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.38■□□□□ 0.05
HTR3AP46098 IGHV3-65-201ENST00000523210 341 ntBASIC15.38■□□□□ 0.05
HTR3AP46098 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.38■□□□□ 0.05
HTR3AP46098 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 LINC00895-201ENST00000629028 1637 ntBASIC15.38■□□□□ 0.05
HTR3AP46098 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HTR3AP46098 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
HTR3AP46098 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR3AP46098 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HTR3AP46098 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HTR3AP46098 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HTR3AP46098 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.37■□□□□ 0.05
HTR3AP46098 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.37■□□□□ 0.05
HTR3AP46098 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.37■□□□□ 0.05
HTR3AP46098 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.37■□□□□ 0.05
HTR3AP46098 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
HTR3AP46098 AP001005.1-201ENST00000571755 1248 ntBASIC15.37■□□□□ 0.05
HTR3AP46098 AC091167.2-201ENST00000579581 588 ntBASIC15.37■□□□□ 0.05
HTR3AP46098 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.37■□□□□ 0.05
HTR3AP46098 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.37■□□□□ 0.05
HTR3AP46098 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HTR3AP46098 AC148477.8-201ENST00000624298 468 ntBASIC15.37■□□□□ 0.05
HTR3AP46098 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.37■□□□□ 0.05
HTR3AP46098 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HTR3AP46098 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.37■□□□□ 0.05
HTR3AP46098 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.37■□□□□ 0.05
HTR3AP46098 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.37■□□□□ 0.05
HTR3AP46098 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTR3AP46098 AC002310.6-201ENST00000624451 1377 ntBASIC15.36■□□□□ 0.05
HTR3AP46098 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HTR3AP46098 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
HTR3AP46098 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HTR3AP46098 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
HTR3AP46098 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HTR3AP46098 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.36■□□□□ 0.05
HTR3AP46098 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTR3AP46098 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms