Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXA11P31270 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HOXA11P31270 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA11P31270 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXA11P31270 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXA11P31270 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXA11P31270 FAM207CP-201ENST00000443486 507 ntBASIC17.8■□□□□ 0.44
HOXA11P31270 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HOXA11P31270 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA11P31270 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.8■□□□□ 0.44
HOXA11P31270 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.8■□□□□ 0.44
HOXA11P31270 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA11P31270 AC024267.1-201ENST00000582320 895 ntBASIC17.8■□□□□ 0.44
HOXA11P31270 LINC02560-201ENST00000596379 459 ntBASIC17.8■□□□□ 0.44
HOXA11P31270 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA11P31270 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HOXA11P31270 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXA11P31270 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXA11P31270 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA11P31270 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
HOXA11P31270 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.79■□□□□ 0.44
HOXA11P31270 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXA11P31270 CETN4P-206ENST00000642099 2168 ntBASIC17.79■□□□□ 0.44
HOXA11P31270 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXA11P31270 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.79■□□□□ 0.44
HOXA11P31270 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 COX20P2-201ENST00000452636 358 ntBASIC17.79■□□□□ 0.44
HOXA11P31270 AC009477.1-201ENST00000452936 217 ntBASIC17.79■□□□□ 0.44
HOXA11P31270 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 AL079307.3-201ENST00000556114 283 ntBASIC17.79■□□□□ 0.44
HOXA11P31270 AC009407.1-201ENST00000568958 598 ntBASIC17.79■□□□□ 0.44
HOXA11P31270 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 AC008761.3-201ENST00000624803 892 ntBASIC17.79■□□□□ 0.44
HOXA11P31270 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXA11P31270 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
HOXA11P31270 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXA11P31270 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXA11P31270 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXA11P31270 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HOXA11P31270 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HOXA11P31270 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HOXA11P31270 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HOXA11P31270 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.78■□□□□ 0.44
HOXA11P31270 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HOXA11P31270 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HOXA11P31270 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.78■□□□□ 0.44
HOXA11P31270 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.78■□□□□ 0.44
HOXA11P31270 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.78■□□□□ 0.44
HOXA11P31270 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 AL080243.2-201ENST00000418783 582 ntBASIC17.78■□□□□ 0.44
HOXA11P31270 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.78■□□□□ 0.44
HOXA11P31270 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.78■□□□□ 0.44
HOXA11P31270 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.78■□□□□ 0.44
HOXA11P31270 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.78■□□□□ 0.44
HOXA11P31270 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.78■□□□□ 0.44
HOXA11P31270 AL844908.2-201ENST00000609461 460 ntBASIC17.78■□□□□ 0.44
HOXA11P31270 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HOXA11P31270 AC092171.3-201ENST00000610122 2651 ntBASIC17.78■□□□□ 0.44
HOXA11P31270 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.78■□□□□ 0.44
HOXA11P31270 FLJ38576-201ENST00000623820 2459 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms