Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
RFX1P22670 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX1P22670 HLA-J-203ENST00000494367 1087 ntBASIC18.06■□□□□ 0.48
RFX1P22670 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RFX1P22670 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX1P22670 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.06■□□□□ 0.48
RFX1P22670 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.06■□□□□ 0.48
RFX1P22670 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.06■□□□□ 0.48
RFX1P22670 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.06■□□□□ 0.48
RFX1P22670 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.06■□□□□ 0.48
RFX1P22670 CYP2A7P1-201ENST00000595391 815 ntBASIC18.06■□□□□ 0.48
RFX1P22670 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX1P22670 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.06■□□□□ 0.48
RFX1P22670 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RFX1P22670 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFX1P22670 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFX1P22670 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.05■□□□□ 0.48
RFX1P22670 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX1P22670 PRSS29P-201ENST00000440800 595 ntBASIC18.05■□□□□ 0.48
RFX1P22670 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.05■□□□□ 0.48
RFX1P22670 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.05■□□□□ 0.48
RFX1P22670 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 AC093512.1-201ENST00000617969 520 ntBASIC18.05■□□□□ 0.48
RFX1P22670 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX1P22670 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX1P22670 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.05■□□□□ 0.48
RFX1P22670 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.05■□□□□ 0.48
RFX1P22670 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFX1P22670 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFX1P22670 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX1P22670 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 BCAR1-209ENST00000546196 1340 ntBASIC18.04■□□□□ 0.48
RFX1P22670 AL512652.2-201ENST00000625156 1716 ntBASIC18.04■□□□□ 0.48
RFX1P22670 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RFX1P22670 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RFX1P22670 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
RFX1P22670 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 FAM58CP-201ENST00000435741 640 ntBASIC18.04■□□□□ 0.48
RFX1P22670 HCG4B-203ENST00000450128 991 ntBASIC18.04■□□□□ 0.48
RFX1P22670 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.04■□□□□ 0.48
RFX1P22670 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 AC004790.2-201ENST00000623588 572 ntBASIC18.04■□□□□ 0.48
RFX1P22670 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX1P22670 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RFX1P22670 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX1P22670 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX1P22670 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX1P22670 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFX1P22670 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX1P22670 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms