Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD58P19256 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 GGT4P-201ENST00000623672 1708 ntBASIC17.81■□□□□ 0.44
CD58P19256 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
CD58P19256 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 YBX2P1-201ENST00000394192 760 ntBASIC17.81■□□□□ 0.44
CD58P19256 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 AC004832.2-201ENST00000426397 482 ntBASIC17.81■□□□□ 0.44
CD58P19256 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.81■□□□□ 0.44
CD58P19256 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.81■□□□□ 0.44
CD58P19256 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 AP002472.1-201ENST00000577490 586 ntBASIC17.81■□□□□ 0.44
CD58P19256 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 AC018695.7-201ENST00000624587 2492 ntBASIC17.81■□□□□ 0.44
CD58P19256 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD58P19256 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.81■□□□□ 0.44
CD58P19256 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CD58P19256 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CD58P19256 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CD58P19256 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CD58P19256 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CD58P19256 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.8■□□□□ 0.44
CD58P19256 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CD58P19256 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.8■□□□□ 0.44
CD58P19256 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
CD58P19256 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 FAM58CP-201ENST00000435741 640 ntBASIC17.8■□□□□ 0.44
CD58P19256 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.8■□□□□ 0.44
CD58P19256 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.8■□□□□ 0.44
CD58P19256 AC091812.2-201ENST00000619081 385 ntBASIC17.8■□□□□ 0.44
CD58P19256 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
CD58P19256 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.8■□□□□ 0.44
CD58P19256 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CD58P19256 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.8■□□□□ 0.44
CD58P19256 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CD58P19256 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD58P19256 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.79■□□□□ 0.44
CD58P19256 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CD58P19256 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 PMS2P4-201ENST00000412466 1052 ntBASIC17.79■□□□□ 0.44
CD58P19256 MCCD1P2-201ENST00000423228 335 ntBASIC17.79■□□□□ 0.44
CD58P19256 ALG1L5P-201ENST00000482043 771 ntBASIC17.79■□□□□ 0.44
CD58P19256 AC092865.5-201ENST00000545435 363 ntBASIC17.79■□□□□ 0.44
CD58P19256 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms