Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH1P12830 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDH1P12830 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH1P12830 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH1P12830 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH1P12830 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH1P12830 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH1P12830 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH1P12830 AC010507.1-201ENST00000633895 436 ntBASIC16.21■□□□□ 0.19
CDH1P12830 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDH1P12830 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 ZNF259P1-201ENST00000407656 1365 ntBASIC16.21■□□□□ 0.19
CDH1P12830 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH1P12830 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CDH1P12830 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH1P12830 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH1P12830 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH1P12830 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH1P12830 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
CDH1P12830 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH1P12830 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDH1P12830 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH1P12830 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CDH1P12830 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CDH1P12830 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 AC092850.2-201ENST00000623821 2697 ntBASIC16.2■□□□□ 0.18
CDH1P12830 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH1P12830 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH1P12830 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDH1P12830 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.2■□□□□ 0.18
CDH1P12830 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 AL513480.1-201ENST00000451731 511 ntBASIC16.2■□□□□ 0.18
CDH1P12830 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH1P12830 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 AC064836.3-201ENST00000607928 673 ntBASIC16.2■□□□□ 0.18
CDH1P12830 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH1P12830 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.2■□□□□ 0.18
CDH1P12830 HLA-A-202ENST00000376806 1854 ntBASIC16.2■□□□□ 0.18
CDH1P12830 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDH1P12830 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH1P12830 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH1P12830 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH1P12830 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH1P12830 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms