Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APOA4P06727 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.68■□□□□ 0.26
APOA4P06727 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
APOA4P06727 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.67■□□□□ 0.26
APOA4P06727 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 AC002310.6-201ENST00000624451 1377 ntBASIC16.67■□□□□ 0.26
APOA4P06727 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
APOA4P06727 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.67■□□□□ 0.26
APOA4P06727 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.67■□□□□ 0.26
APOA4P06727 FDX1P1-201ENST00000449115 551 ntBASIC16.67■□□□□ 0.26
APOA4P06727 AC108073.2-201ENST00000464002 357 ntBASIC16.67■□□□□ 0.26
APOA4P06727 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.67■□□□□ 0.26
APOA4P06727 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.67■□□□□ 0.26
APOA4P06727 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 AL139384.1-201ENST00000612143 3047 ntBASIC16.67■□□□□ 0.26
APOA4P06727 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.67■□□□□ 0.26
APOA4P06727 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.67■□□□□ 0.26
APOA4P06727 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APOA4P06727 AC007950.2-201ENST00000615045 2347 ntBASIC16.67■□□□□ 0.26
APOA4P06727 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
APOA4P06727 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.66■□□□□ 0.26
APOA4P06727 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
APOA4P06727 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 TOP3BP1-201ENST00000420768 1380 ntBASIC16.66■□□□□ 0.26
APOA4P06727 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 CICP6-201ENST00000457191 2729 ntBASIC16.66■□□□□ 0.26
APOA4P06727 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
APOA4P06727 AC026396.1-201ENST00000419388 421 ntBASIC16.66■□□□□ 0.26
APOA4P06727 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 AC108751.1-201ENST00000490852 363 ntBASIC16.66■□□□□ 0.26
APOA4P06727 SLC25A6P2-201ENST00000497974 877 ntBASIC16.66■□□□□ 0.26
APOA4P06727 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.66■□□□□ 0.26
APOA4P06727 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.66■□□□□ 0.26
APOA4P06727 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
APOA4P06727 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 AC129492.6-201ENST00000611383 1305 ntBASIC16.66■□□□□ 0.26
APOA4P06727 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APOA4P06727 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.66■□□□□ 0.26
APOA4P06727 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.66■□□□□ 0.26
APOA4P06727 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.65■□□□□ 0.26
APOA4P06727 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.65■□□□□ 0.26
APOA4P06727 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms