Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 AC009336.1-201ENST00000608941 1553 ntBASIC14.98□□□□□ -0.01
HLA-DPB1P04440 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 NUS1P1-201ENST00000446295 882 ntBASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CLEC4GP1-201ENST00000596555 870 ntBASIC14.98□□□□□ -0.01
HLA-DPB1P04440 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 DBET-201ENST00000630918 3363 ntBASIC14.98□□□□□ -0.01
HLA-DPB1P04440 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPB1P04440 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 STK19B-204ENST00000512515 211 ntBASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AL603832.2-201ENST00000566195 2125 ntBASIC14.97□□□□□ -0.01
HLA-DPB1P04440 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AL591684.3-201ENST00000605187 298 ntBASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AL732292.2-201ENST00000609649 430 ntBASIC14.97□□□□□ -0.01
HLA-DPB1P04440 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms