Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.68□□□□□ -0.38
TCRAP04437 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.68□□□□□ -0.38
TCRAP04437 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 AC006011.2-201ENST00000621313 1158 ntBASIC12.68□□□□□ -0.38
TCRAP04437 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
TCRAP04437 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.68□□□□□ -0.38
TCRAP04437 SNX33P1-201ENST00000592116 1762 ntBASIC12.68□□□□□ -0.38
TCRAP04437 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TCRAP04437 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 INTS4P1-201ENST00000438455 1935 ntBASIC12.68□□□□□ -0.38
TCRAP04437 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TCRAP04437 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TCRAP04437 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TCRAP04437 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRAP04437 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 TOP3BP1-201ENST00000420768 1380 ntBASIC12.68□□□□□ -0.38
TCRAP04437 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRAP04437 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
TCRAP04437 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 AL671277.2-201ENST00000458060 996 ntBASIC12.67□□□□□ -0.38
TCRAP04437 POU5F1P6-201ENST00000466990 990 ntBASIC12.67□□□□□ -0.38
TCRAP04437 AC091607.1-201ENST00000490318 1060 ntBASIC12.67□□□□□ -0.38
TCRAP04437 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.67□□□□□ -0.38
TCRAP04437 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.67□□□□□ -0.38
TCRAP04437 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TCRAP04437 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRAP04437 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRAP04437 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 AC073347.1-201ENST00000421633 2643 ntBASIC12.66□□□□□ -0.38
TCRAP04437 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TCRAP04437 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.66□□□□□ -0.38
TCRAP04437 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms