Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
MBD4O95243 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MBD4O95243 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.73■□□□□ 0.75
MBD4O95243 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MBD4O95243 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MBD4O95243 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.73■□□□□ 0.75
MBD4O95243 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
MBD4O95243 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD4O95243 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
MBD4O95243 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD4O95243 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MBD4O95243 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD4O95243 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD4O95243 CYMP-203ENST00000474680 1263 ntBASIC19.72■□□□□ 0.75
MBD4O95243 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.72■□□□□ 0.75
MBD4O95243 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.72■□□□□ 0.75
MBD4O95243 AL512356.2-201ENST00000546955 174 ntBASIC19.72■□□□□ 0.75
MBD4O95243 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.72■□□□□ 0.75
MBD4O95243 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD4O95243 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD4O95243 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD4O95243 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MBD4O95243 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD4O95243 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD4O95243 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 AP3S2-216ENST00000617003 1561 ntBASIC19.71■□□□□ 0.75
MBD4O95243 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.71■□□□□ 0.75
MBD4O95243 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.71■□□□□ 0.75
MBD4O95243 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD4O95243 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD4O95243 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD4O95243 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MBD4O95243 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD4O95243 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.71■□□□□ 0.74
MBD4O95243 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
MBD4O95243 AC008677.1-201ENST00000519230 1561 ntBASIC19.7■□□□□ 0.74
MBD4O95243 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
MBD4O95243 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD4O95243 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD4O95243 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD4O95243 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD4O95243 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.7■□□□□ 0.74
MBD4O95243 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD4O95243 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD4O95243 AC069262.1-201ENST00000539058 672 ntBASIC19.7■□□□□ 0.74
MBD4O95243 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 SPTSSB-204ENST00000617024 1292 ntBASIC19.7■□□□□ 0.74
MBD4O95243 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.7■□□□□ 0.74
MBD4O95243 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD4O95243 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MBD4O95243 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD4O95243 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD4O95243 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms