Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.69■□□□□ 0.26
RFPL1O75677 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RFPL1O75677 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFPL1O75677 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RFPL1O75677 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 KRT8P39-201ENST00000396270 1433 ntBASIC16.68■□□□□ 0.26
RFPL1O75677 NCF1C-201ENST00000438382 1427 ntBASIC16.68■□□□□ 0.26
RFPL1O75677 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.68■□□□□ 0.26
RFPL1O75677 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFPL1O75677 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.68■□□□□ 0.26
RFPL1O75677 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFPL1O75677 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RFPL1O75677 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.67■□□□□ 0.26
RFPL1O75677 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.67■□□□□ 0.26
RFPL1O75677 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 AC021087.4-201ENST00000563761 564 ntBASIC16.67■□□□□ 0.26
RFPL1O75677 AC145285.3-201ENST00000564603 959 ntBASIC16.67■□□□□ 0.26
RFPL1O75677 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.67■□□□□ 0.26
RFPL1O75677 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.67■□□□□ 0.26
RFPL1O75677 AC103702.1-201ENST00000548801 2630 ntBASIC16.67■□□□□ 0.26
RFPL1O75677 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
RFPL1O75677 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 AC104109.2-201ENST00000602919 1418 ntBASIC16.67■□□□□ 0.26
RFPL1O75677 HYMAI-201ENST00000635591 3347 ntBASIC16.67■□□□□ 0.26
RFPL1O75677 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
RFPL1O75677 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.67■□□□□ 0.26
RFPL1O75677 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFPL1O75677 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RFPL1O75677 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RFPL1O75677 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.66■□□□□ 0.26
RFPL1O75677 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RFPL1O75677 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 MED15P5-201ENST00000423150 992 ntBASIC16.66■□□□□ 0.26
RFPL1O75677 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFPL1O75677 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms