Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.56■□□□□ 0.24
NDUFS3O75489 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.56■□□□□ 0.24
NDUFS3O75489 AC092364.2-201ENST00000596710 2692 ntBASIC16.56■□□□□ 0.24
NDUFS3O75489 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 AC005052.1-201ENST00000625181 2492 ntBASIC16.56■□□□□ 0.24
NDUFS3O75489 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NDUFS3O75489 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NDUFS3O75489 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 HCG4B-203ENST00000450128 991 ntBASIC16.56■□□□□ 0.24
NDUFS3O75489 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.56■□□□□ 0.24
NDUFS3O75489 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.56■□□□□ 0.24
NDUFS3O75489 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.56■□□□□ 0.24
NDUFS3O75489 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.56■□□□□ 0.24
NDUFS3O75489 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.56■□□□□ 0.24
NDUFS3O75489 AL645728.2-201ENST00000641974 660 ntBASIC16.56■□□□□ 0.24
NDUFS3O75489 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NDUFS3O75489 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NDUFS3O75489 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.56■□□□□ 0.24
NDUFS3O75489 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS3O75489 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS3O75489 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS3O75489 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NDUFS3O75489 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 AC104109.2-201ENST00000602919 1418 ntBASIC16.55■□□□□ 0.24
NDUFS3O75489 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS3O75489 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
NDUFS3O75489 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS3O75489 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFS3O75489 IGLL3P-201ENST00000412472 434 ntBASIC16.55■□□□□ 0.24
NDUFS3O75489 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
NDUFS3O75489 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NDUFS3O75489 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS3O75489 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.55■□□□□ 0.24
NDUFS3O75489 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.55■□□□□ 0.24
NDUFS3O75489 AL031432.2-201ENST00000566714 459 ntBASIC16.55■□□□□ 0.24
NDUFS3O75489 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.55■□□□□ 0.24
NDUFS3O75489 AL928711.1-201ENST00000570165 459 ntBASIC16.55■□□□□ 0.24
NDUFS3O75489 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.55■□□□□ 0.24
NDUFS3O75489 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS3O75489 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.55■□□□□ 0.24
NDUFS3O75489 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 GPAA1P2-202ENST00000606848 1787 ntBASIC16.55■□□□□ 0.24
NDUFS3O75489 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NDUFS3O75489 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS3O75489 PCDH8P1-201ENST00000428983 2773 ntBASIC16.55■□□□□ 0.24
NDUFS3O75489 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFS3O75489 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS3O75489 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 HMGA1P7-201ENST00000406908 502 ntBASIC16.54■□□□□ 0.24
NDUFS3O75489 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS3O75489 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms