Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 AC027307.2-201ENST00000591252 911 ntBASIC16.79■□□□□ 0.28
PRAMEF11O60813 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 AC139530.3-201ENST00000620344 690 ntBASIC16.79■□□□□ 0.28
PRAMEF11O60813 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 AC004461.1-201ENST00000412461 403 ntBASIC16.78■□□□□ 0.28
PRAMEF11O60813 AC254562.1-201ENST00000417586 456 ntBASIC16.78■□□□□ 0.28
PRAMEF11O60813 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 AL592309.1-201ENST00000443127 649 ntBASIC16.78■□□□□ 0.28
PRAMEF11O60813 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 KRT8P23-201ENST00000560090 1207 ntBASIC16.78■□□□□ 0.28
PRAMEF11O60813 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF11O60813 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF11O60813 OR6D1P-203ENST00000641209 4860 ntBASIC16.78■□□□□ 0.28
PRAMEF11O60813 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AC005622.1-201ENST00000636801 1703 ntBASIC16.77■□□□□ 0.28
PRAMEF11O60813 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF11O60813 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AC069335.1-201ENST00000489972 472 ntBASIC16.77■□□□□ 0.28
PRAMEF11O60813 AC105233.2-201ENST00000523697 349 ntBASIC16.77■□□□□ 0.28
PRAMEF11O60813 AF228730.5-201ENST00000530288 346 ntBASIC16.77■□□□□ 0.28
PRAMEF11O60813 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 AL691403.2-201ENST00000618460 490 ntBASIC16.77■□□□□ 0.28
PRAMEF11O60813 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF11O60813 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PRAMEF11O60813 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF11O60813 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEF11O60813 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF11O60813 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEF11O60813 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF11O60813 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEF11O60813 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEF11O60813 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEF11O60813 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF11O60813 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEF11O60813 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEF11O60813 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF11O60813 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEF11O60813 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms