Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.58■□□□□ 0.08
HCN1O60741 HCG4B-203ENST00000450128 991 ntBASIC15.58■□□□□ 0.08
HCN1O60741 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.58■□□□□ 0.08
HCN1O60741 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.58■□□□□ 0.08
HCN1O60741 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.58■□□□□ 0.08
HCN1O60741 MTDHP5-201ENST00000598980 586 ntBASIC15.58■□□□□ 0.08
HCN1O60741 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HCN1O60741 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
HCN1O60741 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.58■□□□□ 0.08
HCN1O60741 AC002310.6-201ENST00000624451 1377 ntBASIC15.58■□□□□ 0.08
HCN1O60741 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.58■□□□□ 0.08
HCN1O60741 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
HCN1O60741 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HCN1O60741 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 AL590787.1-201ENST00000568856 1315 ntBASIC15.57■□□□□ 0.08
HCN1O60741 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 AC008741.2-201ENST00000612792 3115 ntBASIC15.57■□□□□ 0.08
HCN1O60741 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 RNF216P1-203ENST00000404404 2427 ntBASIC15.57■□□□□ 0.08
HCN1O60741 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 FRMD8P1-201ENST00000440433 1524 ntBASIC15.57■□□□□ 0.08
HCN1O60741 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
HCN1O60741 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.57■□□□□ 0.08
HCN1O60741 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.57■□□□□ 0.08
HCN1O60741 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HCN1O60741 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.56■□□□□ 0.08
HCN1O60741 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HCN1O60741 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.56■□□□□ 0.08
HCN1O60741 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.56■□□□□ 0.08
HCN1O60741 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.56■□□□□ 0.08
HCN1O60741 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.56■□□□□ 0.08
HCN1O60741 AP002490.2-201ENST00000524791 560 ntBASIC15.56■□□□□ 0.08
HCN1O60741 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.56■□□□□ 0.08
HCN1O60741 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.56■□□□□ 0.08
HCN1O60741 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.56■□□□□ 0.08
HCN1O60741 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
HCN1O60741 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.56■□□□□ 0.08
HCN1O60741 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms