Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM1O00151 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PDLIM1O00151 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.87■□□□□ 0.13
PDLIM1O00151 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM1O00151 HCG4P8-203ENST00000443049 980 ntBASIC15.87■□□□□ 0.13
PDLIM1O00151 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM1O00151 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.87■□□□□ 0.13
PDLIM1O00151 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM1O00151 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.87■□□□□ 0.13
PDLIM1O00151 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM1O00151 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PDLIM1O00151 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM1O00151 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
PDLIM1O00151 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM1O00151 AC124864.1-201ENST00000623408 392 ntBASIC15.87■□□□□ 0.13
PDLIM1O00151 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM1O00151 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PDLIM1O00151 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM1O00151 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM1O00151 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM1O00151 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 AC246785.2-201ENST00000432512 513 ntBASIC15.86■□□□□ 0.13
PDLIM1O00151 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM1O00151 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PDLIM1O00151 AP002490.2-201ENST00000524791 560 ntBASIC15.86■□□□□ 0.13
PDLIM1O00151 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PDLIM1O00151 AC092329.2-201ENST00000598402 547 ntBASIC15.86■□□□□ 0.13
PDLIM1O00151 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PDLIM1O00151 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PDLIM1O00151 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PDLIM1O00151 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM1O00151 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM1O00151 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM1O00151 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM1O00151 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.85■□□□□ 0.13
PDLIM1O00151 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms