Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM235A6NFC5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 LINC00982-205ENST00000420957 435 ntBASIC14.23□□□□□ -0.13
TMEM235A6NFC5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 AC012306.2-201ENST00000609350 630 ntBASIC14.23□□□□□ -0.13
TMEM235A6NFC5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM235A6NFC5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 AC067930.6-201ENST00000623257 4947 ntBASIC14.22□□□□□ -0.13
TMEM235A6NFC5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 SPDYE21P-201ENST00000413323 827 ntBASIC14.22□□□□□ -0.13
TMEM235A6NFC5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 AC097493.4-201ENST00000641197 219 ntBASIC14.22□□□□□ -0.13
TMEM235A6NFC5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 SNX33P1-201ENST00000592116 1762 ntBASIC14.22□□□□□ -0.13
TMEM235A6NFC5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM235A6NFC5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms