Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 KRT18P34-201ENST00000488218 1270 ntBASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 MTDHP5-201ENST00000598980 586 ntBASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC196A0A1B0GTZ2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 WASH6P-202ENST00000359512 1437 ntBASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 AL078644.1-201ENST00000609881 752 ntBASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 MST1L-201ENST00000442552 2185 ntBASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC196A0A1B0GTZ2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC196A0A1B0GTZ2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC196A0A1B0GTZ2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC196A0A1B0GTZ2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC196A0A1B0GTZ2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC196A0A1B0GTZ2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC196A0A1B0GTZ2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC196A0A1B0GTZ2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms