Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 TERC-201ENST00000602385 541 ntBASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 AL139011.1-202ENST00000642063 584 ntBASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV5A0A0B4J249 SNX33P1-201ENST00000592116 1762 ntBASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 AL512652.2-201ENST00000625156 1716 ntBASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV5A0A0B4J249 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NSUN5P1-202ENST00000421140 1535 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NSUN5P2-203ENST00000457352 1529 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 DUX4L26-201ENST00000489078 1255 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 LINC01238-205ENST00000567549 1107 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 AC104640.1-201ENST00000562617 2109 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 AC092850.2-201ENST00000623821 2697 ntBASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV5A0A0B4J249 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AL590787.1-201ENST00000568856 1315 ntBASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms