Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4B1Q9Y6B7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
AP4B1Q9Y6B7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP4B1Q9Y6B7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4B1Q9Y6B7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP4B1Q9Y6B7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 MIR5100-201ENST00000579544 119 ntBASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AL591684.3-201ENST00000605187 298 ntBASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AL691432.3-201ENST00000621860 400 ntBASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP4B1Q9Y6B7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 FAM220CP-201ENST00000395253 831 ntBASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 AC007967.3-201ENST00000434308 558 ntBASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.02■□□□□ 0.16
AP4B1Q9Y6B7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP4B1Q9Y6B7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms