Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 KRT8P39-201ENST00000396270 1433 ntBASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 HCG4-201ENST00000418983 998 ntBASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 AC087641.1-201ENST00000557561 1021 ntBASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 AC104692.2-201ENST00000603054 253 ntBASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA11Q9Y5H2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA11Q9Y5H2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA11Q9Y5H2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 SNX33P1-201ENST00000592116 1762 ntBASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 AL031284.1-201ENST00000419297 478 ntBASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 PMS2P1-201ENST00000431037 1228 ntBASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 AC108073.2-201ENST00000464002 357 ntBASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 AC093909.1-201ENST00000504731 1122 ntBASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA11Q9Y5H2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms