Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCBQ9Y3I0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 AC104989.1-201ENST00000519711 778 ntBASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.71■□□□□ 0.91
RTCBQ9Y3I0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.7■□□□□ 0.91
RTCBQ9Y3I0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 CDC14C-201ENST00000428251 1719 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 BNIP3P42-201ENST00000454982 569 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 FAM8A2P-201ENST00000528813 1142 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 TIMM17BP1-201ENST00000545713 516 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 BNIP3P29-201ENST00000598302 571 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 AC074044.1-201ENST00000609673 707 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 AC011447.5-201ENST00000616168 564 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 AL139011.1-202ENST00000642063 584 ntBASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCBQ9Y3I0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 ANKRD19P-201ENST00000338192 862 ntBASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 PCDHB17P-201ENST00000539533 2393 ntBASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 CLK3P2-201ENST00000427566 1453 ntBASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTCBQ9Y3I0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTCBQ9Y3I0 AC092068.3-201ENST00000587894 2016 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms