Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AL353705.2-201ENST00000428243 662 ntBASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AC002472.2-201ENST00000442739 958 ntBASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 RN7SL204P-201ENST00000582831 262 ntBASIC19.88■□□□□ 0.77
SALL1Q9NSC2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AL138828.2-201ENST00000615812 383 ntBASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AL590560.3-201ENST00000623350 461 ntBASIC19.88■□□□□ 0.77
SALL1Q9NSC2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 AC006538.1-201ENST00000567905 1585 ntBASIC19.88■□□□□ 0.77
SALL1Q9NSC2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SALL1Q9NSC2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 TSPY16P-201ENST00000449843 468 ntBASIC19.87■□□□□ 0.77
SALL1Q9NSC2 COX20P2-201ENST00000452636 358 ntBASIC19.87■□□□□ 0.77
SALL1Q9NSC2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SALL1Q9NSC2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 AC236430.1-201ENST00000402231 743 ntBASIC19.86■□□□□ 0.77
SALL1Q9NSC2 MRPS18AP1-201ENST00000414458 589 ntBASIC19.86■□□□□ 0.77
SALL1Q9NSC2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 AC027369.6-201ENST00000525520 931 ntBASIC19.86■□□□□ 0.77
SALL1Q9NSC2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.86■□□□□ 0.77
SALL1Q9NSC2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 AC092171.3-201ENST00000610122 2651 ntBASIC19.86■□□□□ 0.77
SALL1Q9NSC2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL1Q9NSC2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms