Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYRM4Q9HD34 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.58■□□□□ 0.09
LYRM4Q9HD34 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 RPSAP43-201ENST00000402237 625 ntBASIC15.58■□□□□ 0.08
LYRM4Q9HD34 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 AC026120.1-201ENST00000611536 926 ntBASIC15.58■□□□□ 0.08
LYRM4Q9HD34 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LYRM4Q9HD34 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 AC112482.1-201ENST00000492080 688 ntBASIC15.57■□□□□ 0.08
LYRM4Q9HD34 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 AC010327.4-202ENST00000591484 748 ntBASIC15.57■□□□□ 0.08
LYRM4Q9HD34 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.57■□□□□ 0.08
LYRM4Q9HD34 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYRM4Q9HD34 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms