Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 IGHV3-22-201ENST00000520721 359 ntBASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 IGHV3-65-201ENST00000523210 341 ntBASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 AC012640.2-201ENST00000561606 901 ntBASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLK4Q9HAZ1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 SLC25A1P3-201ENST00000395415 828 ntBASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 PTCHD3P3-201ENST00000403073 906 ntBASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AC124947.2-201ENST00000547118 1133 ntBASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AC145285.3-201ENST00000564603 959 ntBASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLK4Q9HAZ1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 PRSS29P-201ENST00000440800 595 ntBASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 PAWRP1-201ENST00000451083 565 ntBASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 AP002414.3-201ENST00000589352 1468 ntBASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK4Q9HAZ1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 PKD1P5-201ENST00000532415 10291 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms