Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXP3Q9BZS1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 NFIC-211ENST00000641145 8399 ntBASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 TOP3BP1-201ENST00000420768 1380 ntBASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 BX842568.4-201ENST00000421222 227 ntBASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 OR7E14P-202ENST00000530490 1290 ntBASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AC012640.2-201ENST00000561606 901 ntBASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AL590787.1-201ENST00000568856 1315 ntBASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXP3Q9BZS1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXP3Q9BZS1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms