Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC4.51□□□□□ -1.69
LCE3DQ9BYE3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LCE3DQ9BYE3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC4.51□□□□□ -1.69
LCE3DQ9BYE3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LCE3DQ9BYE3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LCE3DQ9BYE3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC4.51□□□□□ -1.69
LCE3DQ9BYE3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 GPR89P-201ENST00000407924 1495 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AL645728.1-201ENST00000366221 2101 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TSPY12P-201ENST00000421279 868 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 HLA-J-202ENST00000469281 1241 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SEC1P-202ENST00000473944 940 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC116562.2-201ENST00000507042 360 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 RN7SL275P-201ENST00000582762 335 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms