Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.28□□□□□ -0.28
CHRDL1Q9BU40 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHRDL1Q9BU40 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 PRYP5-201ENST00000451909 266 ntBASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 CLEC4GP1-201ENST00000596555 870 ntBASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AC064862.7-201ENST00000604520 867 ntBASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AL355877.3-201ENST00000622820 899 ntBASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AL139288.1-201ENST00000623748 933 ntBASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AL022326.1-202ENST00000641533 845 ntBASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRDL1Q9BU40 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRDL1Q9BU40 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms